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Detection of TR34/L98H pan-azole-resistant Aspergillus fumigatus in poultry farm environments

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Introduction: Poultry farms have been recognized as environments prone to fungal contamination. However, the occurrence of azole-resistant Aspergillus fumigatus and its cytotoxic potential remain insufficiently characterized. This study aimed to characterize the occurrence, cytotoxic potential, and azole-resistance profile of Aspergillus section Fumigati in poultry farms.Methods: A total of 420 samples, including air (n = 47), electrostatic dust cloths (n = 87), bedding (n = 87), feed (n = 95), swabs (n = 87), workers’ masks (n = 2), and broiler breast (n = 15), were obtained. Fungal characterization was performed through culture-based methods (27 °C and 37 °C), followed by azole resistance screening according to EUCAST guidelines. Resistant isolates were subjected to whole-genome sequencing and a targeted analysis of cyp51A mutations. The cytotoxicity potential of fungal isolates and environmental samples was evaluated using selected cell lines representing respiratory organs (human alveolar [A549]) and detoxification organs (swine kidney [SK]/hepatocellular carcinoma [HepG2]). Results: Seven putative Aspergillus fumigatus isolates exhibited pan-azole resistance (MICs: ≥ 2 mg/L ITR/VOR; ≥ 1mg/L for POS). Four isolates carried the TR34/L98H mutation and were recovered from bedding (n = 3) and air (n = 1), suggesting the presence of resistant A. fumigatus in poultry farm matrices. Although 12% of isolates induced toxicity on both cell lines (17/145), no significant association was observed between isolate cytotoxicity and environmental sample toxicity, suggesting that additional biological and chemical components may contribute to the overall toxicological profile of farm environments. Discussion: The study highlights the occurrence of azole-resistant A. fumigatus in poultry farms and supports integrated surveillance approaches addressing antifungal resistance and environmental exposure risks in poultry production.

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The author(s) declared that financial support was received for this work and/or its publication. This work was supported by FCT – Fundação para a Ciência e Tecnologia, I.P., through project UI/BD/153746/2022 and the CE3C unit UID/00329/2025. It was also supported by project 2023.01366.BD.

Palavras-chave

Aspergillus fumigatus Azole-resistance profile Bedding material cyp51A gene mutations Cytotoxic potential One health FCT_UI/BD/153746/2022 CE3C unit UID/00329/2025 2023.01366.BD

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Citação

Gomes B, Dias M, Cervantes R, Gonçalves L, Carolino E, Viegas C, et al. Detection of TR34/L98H pan-azole-resistant Aspergillus fumigatus in poultry farm environments. Front Fungal Biol. 2026;7:1858050.

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Frontiers Media SA

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